ERGO™ Genomes in ERGO Integrated Genomics
 
ERGO Overview ERGO Tutorial FAQs Support ERGO Publications
 
 

Number of genomes available in ERGO™ ( ), genomes available in NCBI ( ) :
 
All genomes in ERGO  


1218/980
Bacteria  


792/607
Archaea  


49/44
Viral  


241/213
Eukarya  


136/116

No. Genome Name  ORG Code  Domain Source_Name Completion Status
1. Aeropyrum pernix K1 AP Kazusa Institute: Japan 100%
2. Archaeoglobus fulgidus DSM4304 AG TIGR / UIUC 100%
3. Caldivirga maquilingensis IC-167, ATCC 700844, DSM 13496 CMA Joint Genome Institute 90%
4. Cenarchaeum symbiosum UCA GenBank  
5. Cenarchaeum symbiosum UCB GenBank  
6. Ferroplasma acidarmanus FAC Joint Genome Institute 90%
7. Haloarcula marismortui ATCC 43049 HMA Institute for System Biology 100%
8. Halobacterium halobium HH EMBL  
9. Halobacterium sp. NRC-1 HSL Halobacterium Genome Consortium 100%
10. Haloferax volcanii DS2 ATCC-29605 VO Integrated Genomics / Scranton University 90%
11. Haloquadratum walsbyi HWA Max Planck Institute for Biochemistry, Germany 100%
12. Metallosphaera sedula DSM 5348 MSE Joint Genome Institute 90%
13. Methanobacterium thermoautotrophicum TH Genome Therapeutics / Ohio State University 100%
14. Methanococcus jannaschii DSM 2661 MJ TIGR / UIUC 100%
15. Methanococcus maripaludis C5 MMP Joint Genome Institute 100%
16. Methanococcus maripaludis LL MM University of Washington: Seattle 100%
17. Methanococcus vannielii SB MVA Joint Genome Institute 90%
18. Methanocorpusculum labreanum Z MLA Joint Genome Institute 100%
19. Methanoculleus marisnigri JR1 MMN Joint Genome Institute 100%
20. Methanopyrus kandleri AV19 MPX Fidelity Systems: Inc. 100%
21. Methanosaeta thermophila PT MTM Joint Genome Institute 100%
22. Methanosarcina acetivorans C2A MAC Whitehead Institute 100%
23. Methanosarcina barkeri fusaro MBA Joint Genome Institute 90%
24. Methanosarcina mazei Go1 MMZ Goettingen Genomics Laboratory / Integated Genomics 100%
25. Methanosphaera stadtmanae DSM 3091 MST Goettingen Genomics Laboratory 100%
26. Methanospirillum hungatei JF-1 MHU Joint Genome Institute 100%
27. Nanoarchaeum equitans Kin4-M NEQ Diversa 100%
28. Natronomonas pharaonis DSM 2160 NPH Max Planck Institute, Germany 100%
29. Picrophilus torridus PTO Integrated Genomics (University of Goettingen) 90%
30. Pyrobaculum aerophilum PK California Technology Institute 100%
31. Pyrobaculum arsenaticum DSM 13514 PAA Joint Genome Institute 90%
32. Pyrobaculum calidifontis JCM 11548 PCL Joint Genome Institute 100%
33. Pyrococcus abyssii PO Genoscope: France 100%
34. Pyrococcus furiosus PF University of Utah 100%
35. Pyrococcus horikoshii OT3 PH NITE: Japan 100%
36. Staphylothermus marinus F1 SMR Joint Genome Institute 100%
37. Sulfolobus acidocaldarius DSM 639 SD EMBL 100%
38. Sulfolobus solfataricus P2 SS LBMGE: France 100%
39. Sulfolobus tokodaii str. 7 STO NITE: Japan 100%
40. Thermococcus kodakaraensis KOD1 TKO Kyoto University, Japan 100%
41. Thermofilum pendens Hrk 5 TPE Joint Genome Institute 100%
42. Thermoplasma acidophilum TAC Max-Planck-Institute for Biochemistry 100%
43. Thermoplasma volcanium GSS1 TVO AIST 100%
44. uncultured crenarchaeote 4B7 UCF GenBank  
45. uncultured crenarchaeote 74A4 UCE GenBank  
46. uncultured marine group II euryarchaeote 37F11 UCC GenBank  
47. Acidiphilium cryptum JF-5 ACR Joint Genome Institute 90%
48. Acidithiobacillus ferrooxidans ATCC-23270 FE Integrated Genomics 90%
49. Acidobacterium sp. Ellin345 AEL Joint Genome Institute 100%
50. Acidothermus cellulolyticus 11B, ATCC 43068 ACE Joint Genome Institute 90%
51. Acidovorax avenae subsp. citrulli AAC00-1 AAV Joint Genome Institute 90%
52. Acidovorax sp. JS42 ACI Joint Genome Institute 100%
53. Acinetobacter baumannii ATCC 17978 ABU Yale University 100%
54. Acinetobacter baylyi ADP1 ABA Genoscope 100%
55. Acinetobacter calcoaceticus ADP ACA Genoscope 100%
56. Acinetobacter species ATCC 33305: ADP1 AC Integrated Genomics (UIC) 90%
57. Actinobacillus actinomycetemcomitans HK1651 AB University Oklahoma 90%
58. Actinobacillus pleuropneumoniae AO EMBL  
59. Actinobacillus pleuropneumoniae L20 APL National Research Council of Canada 100%
60. Aeromonas hydrophila subsp. hydrophila ATCC 7966 AH TIGR 100%
61. Aeromonas salmonicida subsp. salmonicida A449 ASA National Research Council, Canada 100%
62. Agrobacterium tumefaciens C58 ATU Cereon Genomics 100%
63. Agrobacterium tumefaciens str. C58 ATM University of Washington 100%
64. Alcaligenes eutrophus AE EMBL  
65. Alcanivorax borkumensis SK2 ABO Bielefeld University 100%
66. Alkalilimnicola ehrlichei MLHE-1 AER Joint Genome Institute 100%
67. Amycolatopsis mediterranei S699 AME University of Washington  
68. Anabaena sp. PCC7120 AN Kasuza Institute: Japan 100%
69. Anabaena variabilis ATCC 29413 AVA Joint Genome Institute 100%
70. Anaeromyxobacter dehalogenans 2CP-C ADE Joint Genome Institute 100%
71. Anaplasma marginale str. St. Maries AMA Washington State University 100%
72. Anaplasma phagocytophilum HZ APH TIGR 100%
73. Aquifex aeolicus VF5 AA Diversa 100%
74. Arthrobacter aurescens TC1 AAU TIGR 100%
75. Arthrobacter sp. FB24 ART Joint Genome Institute 100%
76. Atopobium minutum ATCC 33267 AMI Integrated Genomics (DSMZ) 90%
77. Azoarcus sp. BH72 AZA University of Bielefeld, Germany 100%
78. Azoarcus sp. EbN1 AZO Max Planck Institute of Biochemistry 100%
79. Azospirillum brasilense AZ EMBL  
80. Azotobacter vinelandii AV Joint Genome Institute 90%
81. Bacillus anthracis A2012 BAT TIGR 100%
82. Bacillus anthracis Ames BAN TIGR 100%
83. Bacillus anthracis str. A1055 BAA TIGR 90%
84. Bacillus anthracis str. Ames 0581 'Ames ancestor' BAH TIGR 100%
85. Bacillus anthracis str. Australia 94 BAC TIGR 90%
86. Bacillus anthracis str. CNEVA-9066 BAI TIGR 90%
87. Bacillus anthracis str. Kruger B BAS TIGR 90%
88. Bacillus anthracis str. Sterne BAR Joint Genome Institute 100%
89. Bacillus anthracis str. Vollum BNT TIGR 90%
90. Bacillus cereus ATCC 10987 BCR TIGR 100%
91. Bacillus cereus ATCC 14579 ZC Integrated Genomics (DARPA) 100%
92. Bacillus cereus E33L BSC Joint Genome Institute 100%
93. Bacillus cereus subsp. cytotoxis NVH391-98 BCS Joint Genome Institute 90%
94. Bacillus cereus ZK BCU Joint Genome Institute 100%
95. Bacillus circulans BCI GenBank  
96. Bacillus clausii KSM-K16 BCA Kao Corporation, Japan 100%
97. Bacillus coagulans 36D1 BCG Joint Genome Institute 90%
98. Bacillus firmus BF EMBL  
99. Bacillus halodurans C-125 HD JAMSTEC 100%
100. Bacillus licheniformis BL EMBL  
101. Bacillus licheniformis ATCC 14580 BLC Novozymes Biotech 100%
102. Bacillus licheniformis DSM 13 BLH Goettingen Genomics Laboratory 100%
103. Bacillus megaterium BI EMBL  
104. Bacillus pumilus F036B BPI Baylor College of Medicine 90%
105. Bacillus pumilus SAFR-032 BPJ Baylor College of Medicine 90%
106. Bacillus sp. B14905 BSA J. Craig Venter Institute 90%
107. Bacillus sp. NRRL B-14911 BSB J. Craig Venter Institute 90%
108. Bacillus sphaericus BW EMBL  
109. Bacillus stearothermophilus 10 BE University Oklahoma 90%
110. Bacillus subtilis 168 BS International Consortium 100%
111. Bacillus thuringiensis israelensis ATCC-35646 BTH Integrated Genomics (DARPA) 90%
112. Bacillus thuringiensis serovar konkukian str. 97-27 BTR DoE/Joint Genome Institute 100%
113. Bacillus weihenstephanensis KBAB4 BWE Joint Genome Institute 90%
114. Bacteroides fragilis NCTC-9343 BX Sanger Institute 90%
115. Bacteroides thetaiotamicron VPI-5482 BTI Washington University: St. Louis: AstraZenica 100%
116. Bartonella bacilliformis KC583 BBC TIGR 100%
117. Bartonella henselae str. Houston-1 BHN University of Uppsala, Sweden 100%
118. Bartonella quintana str. Toulose BQU University of Uppsala 100%
119. Baumannia cicadellinicola str. Hc BCC TIGR 100%
120. Bdellovibrio bacteriovorus HD100 BBA Max-Planck-Institute in Tuebingen 100%
121. Bifidobacterium adolescentis ATCC 15703 BAO Gifu University, Japan 100%
122. Bifidobacterium adolescentis L2-32 BDL University of Washington 90%
123. Bifidobacterium longum BLO Nestle 100%
124. Bifidobacterium longum DJ010A BLN Joint Genome Institute 90%
125. Blastopirellula marina DSM 3645 BMR J. Craig Venter Institute 90%
126. Bordetella bronchiseptica RB50 BY Sanger Institute 90%
127. Bordetella parapertussis 12822 BPA Sanger Institute 90%
128. Bordetella pertussis Tohama I BP Sanger Institute 100%
129. Borrelia afzelii PKo BZ Fritz Lipman Institute, Germany 100%
130. Borrelia burgdorferi BB TIGR 100%
131. Borrelia garinii BG EMBL  
132. Bradyrhizhobium japonicum str. USDA 110 BJP Kazusa Institute: Japan 100%
133. Bradyrhizobium sp. BTAi1 BBT Joint Genome Institute 90%
134. Brevibacillus brevis BBR GenBank  
135. Brevibacterium linens BL2 BLI Joint Genome Institute 90%
136. Brucella abortus BV University of Minnesota 90%
137. Brucella melitensis 16M BME Integrated Genomics / Scranton University 100%
138. Brucella melitensis suis 1330 BSU TIGR 100%
139. Buchnera aphidicola BBP Centro de Astrobiologia 100%
140. Buchnera aphidicola str. Cc BAL University of Valencia, Spain 100%
141. Buchnera aphidicola strain AP BUC RIKEN: Japan 100%
142. Buchnera aphidicola strain SG BAP University of Uppsala: Sweeden 100%
143. Burkholderia ambifaria AMMD BAM Joint Genome Institute 100%
144. Burkholderia cenocepacia AU1054 BCN Joint Genome Institute 100%
145. Burkholderia cenocepacia HI2424 BCO Joint Genome Institute 100%
146. Burkholderia cenocepacia PC184 BCP Broad Institute 90%
147. Burkholderia cepacia J2315 BCE Sanger Institute 100%
148. Burkholderia dolosa AUO158 BDO Broad Institute 90%
149. Burkholderia mallei ATCC 23344 BMA TIGR 100%
150. Burkholderia mallei NCTC 10229 BML TIGR 100%
151. Burkholderia mallei SAVP1 BAE TIGR 100%
152. Burkholderia multivorans ATCC 17616 BMU Joint Genome Institute 90%
153. Burkholderia pseudomallei 1106a BPD TIGR 90%
154. Burkholderia pseudomallei 1106b BPO TIGR 90%
155. Burkholderia pseudomallei 1655 BPM TIGR 90%
156. Burkholderia pseudomallei 668 BPL TIGR 100%
157. Burkholderia pseudomallei K96243 BPS Sanger Institute 100%
158. Burkholderia strain 383, ATCC 17760 BUS Joint Genome Institute 100%
159. Burkholderia thailandensis E264 BTA TIGR 100%
160. Burkholderia vietnamiensis strain G4, ATCC 53617 BVI Joint Genome Institute 100%
161. Burkholderia xenovorans LB400 BU Joint Genome Institute 100%
162. Caldicellulosiruptor saccharolyticus DSM 8903 CSC Joint Genome Institute 90%
163. Campylobacter fetus subsp. fetus 82-40 CFL TIGR 100%
164. Campylobacter jejuni NCTC-11168 CJ Sanger Institute 100%
165. Campylobacter jejuni subsp. jejuni 81-176 CJJ TIGR 100%
166. Candidatus Blochmannia floridanus CBF University of Valencia 100%
167. Candidatus Carsonella ruddii PV CCR Kitasato University, Japan 100%
168. Candidatus Desulfococcus oleovorans Hxd3 CDE Joint Genome Institute 90%
169. Candidatus Kuenenia stuttgartiensis KST Genoscope 90%
170. Candidatus Pelagibacter ubique HTCC1062 CPL Oregon State University 100%
171. Candidatus Ruthia magnifica str. Cm CRU Joint Genome Institute 100%
172. Candidatus Vesicomyosocius okutanii HA CVO Japan Agency for Marine-Earth Science and Technology 100%
173. Caulobacter crescentus CO TIGR 100%
174. Caulobacter sp. K31 CAL Joint Genome Institute 90%
175. Cellulophaga sp. MED134 CEL J. Craig Venter Institute 90%
176. Chlamydia trachomatis A/HAR-13 RMH NIH / RML 100%
177. Chlamydia trachomatis D/UW-3/Cx CT Stanford University 100%
178. Chlamydia trachomatis MoPn QT TIGR 100%
179. Chlamydophila abortus S26/3 CAB Sanger Institute 90%
180. Chlamydophila felis Fe/C-56 CFE Kitasato Institute 100%
181. Chlamydophila pneumoniae AR39 QP TIGR 100%
182. Chlamydophila pneumoniae CWL029 CQ Stanford University 100%
183. Chlamydophila pneumoniae J138 CPX Kyushu University: Japan 100%
184. Chlamydophila pneumoniae TW-183 CPN Altana Pharmaceuticals 100%
185. Chlamydophilia caviae GPIC CCA TIGR 100%
186. Chlorobium limicola DSM 245 CLI Joint Genome Institute 90%
187. Chlorobium phaeobacteroides BS1 CPH Joint Genome Institute 90%
188. Chlorobium phaeobacteroides DSMZ266 CPO Joint Genome Institute 100%
189. Chlorobium tepidum CL TIGR 100%
190. Chlorochromatium aggregatum CCH Joint Genome Institute 100%
191. Chloroflexus aggregans DSM 9485 CAG Joint Genome Institute 90%
192. Chloroflexus aurantiacus J-10 CAU Joint Genome Institute 90%
193. Chlostridium tetani E88 Massachusetts CTT Gottingen Genomics Laboratory 100%
194. Chromobacterium violaceum ATCC12472 CVI Brazilian Genome 100%
195. Chromohalobacter salexigens DSM3043 CSA Joint Genome Institute 100%
196. Clavibacter michiganensis subsp. michiganensis NCPPB 382 CMI University of Bielefeld, Germany 100%
197. Clavibacter michiganensis subsp. sepedonicus CLM Sanger Institute 100%
198. Clostridium acetobutylicum ATCC-824D CA Genome Therapeutics 100%
199. Clostridium beijerincki NCIMB 8052 CBE Joint Genome Institute 90%
200. Clostridium botulinum A str. ATCC 3502 CB Sanger Institute 100%
201. Clostridium cellulolyticum H10 CCE Joint Genome Institute 90%
202. Clostridium difficile 630 DF Sanger Institute 100%
203. Clostridium novyi NT CNO Johns Hopkins University 100%
204. Clostridium perfringens 13 CPE University of Tsukuba 100%
205. Clostridium perfringens ATCC 13124 CPF TIGR 100%
206. Clostridium perfringens SM101 CPR TIGR 100%
207. Clostridium phytofermentans ISDg, ATCC 700394 CPY Joint Genome Institute 90%
208. Clostridium sp. OhILAs CLO Joint Genome Institute 90%
209. Clostridium thermocellum ATCC-27405 CTH Joint Genome Institute 100%
210. Colwellia psychrerythraea 34H CPS TIGR 100%
211. Comamonas testosteroni KF-1, DSM 14576 CTS Joint Genome Institute 90%
212. Corynebacterium diphtheriae NCTC-13129 DI Sanger Institute 90%
213. Corynebacterium efficiens YS-314 CEF Ajinomoto Inc. 100%
214. Corynebacterium glutamicum ATCC-13032 CGL Kyowa Hakko Kogyo Co.: Japan 100%
215. Corynebacterium glutamicum R CGU RITE, Japan 100%
216. Corynebacterium jeikeium CJE University of Bielefeld 100%
217. Coxiella burnetii RSA 493 CBU TIGR 100%
218. Croceibacter atlanticus HTCC2559 CAT J. Craig Venter Institute 90%
219. Crocosphaera watsonii WH 8501 CWA Joint Genome Institute 90%
220. Cytophaga hutchinsonii ATCC-33406 CHU Joint Genome Institute 100%
221. Dechloromonas aromatica RCB DEA Joint Genome Institute 90%
222. Dehalococcoides ethenogenes 195 DET TIGR 100%
223. Dehalococcoides sp. BAV1 DEH Joint Genome Institute 90%
224. Deinococcus geothermalis, DSM11300 DGE Joint Genome Institute 100%
225. Deinococcus radiodurans R1 DR TIGR 100%
226. Delftia acidovorans SPH-1 DAI Joint Genome Institute 90%
227. Desulfitobacterium halfniense DCB-2 DHA Joint Genome Institute 90%
228. Desulfotalea psychrophila LSv54 DPS Max-Planck-Institute for Marine Microbiology 100%
229. Desulfotomaculum reducens MI-1 DRE Joint Genome Institute 100%
230. Desulfovibrio desulfuricans G20 DDS Joint Genome Institute 100%
231. Desulfovibrio vulgaris DS EMBL  
232. Desulfovibrio vulgaris Hildenborough DVH TIGR 100%
233. Desulfovibrio vulgaris subsp. vulgaris DP4 DVU Joint Genome Institute 100%
234. Desulfuromonas acetoxidans DAC Joint Genome Institute 85%
235. Dichelobacter nodosus DN EMBL  
236. Dinoroseobacter shibae DFL 12 DSH Joint Genome Institute 90%
237. Ehrlichia canis Jake strain ECA Joint Genome Institute 100%
238. Ehrlichia chaffeensis ECH Ohio University 90%
239. Ehrlichia chaffeensis str. Arkansas ECE TIGR 100%<